gnu/packages/bioconductor.scm:8728:13: r-scry: updating from version 1.10.0 to version 1.12.0... gnu/packages/bioconductor.scm:8738:5: r-scry: consider removing this propagated input: r-hdf5array gnu/packages/bioconductor.scm:18640:13: r-delayedmatrixstats: updating from version 1.20.0 to version 1.22.0... gnu/packages/bioconductor.scm:14739:13: r-annotatr: updating from version 1.24.0 to version 1.26.0... gnu/packages/bioconductor.scm:20594:13: r-tximeta: updating from version 1.16.1 to version 1.18.0... gnu/packages/bioconductor.scm:17291:13: r-multiassayexperiment: updating from version 1.24.0 to version 1.26.0... gnu/packages/bioconductor.scm:17313:5: r-multiassayexperiment: consider adding this native input: r-r-rsp gnu/packages/bioconductor.scm:17126:13: r-bioccheck: updating from version 1.34.3 to version 1.36.0... gnu/packages/bioconductor.scm:17137:5: r-bioccheck: consider adding this propagated input: r-biocfilecache gnu/packages/bioconductor.scm:15019:13: r-ncdfflow: updating from version 2.44.0 to version 2.46.0... gnu/packages/bioconductor.scm:15030:5: r-ncdfflow: consider adding this propagated input: r-cpp11 gnu/packages/bioconductor.scm:15030:5: r-ncdfflow: consider removing this propagated input: r-rcpp gnu/packages/bioconductor.scm:15030:5: r-ncdfflow: consider removing this propagated input: r-rcpparmadillo gnu/packages/bioconductor.scm:4970:13: r-iranges: updating from version 2.32.0 to version 2.34.0... gnu/packages/bioconductor.scm:7455:13: r-methylkit: updating from version 1.24.0 to version 1.26.0... gnu/packages/bioconductor.scm:14370:13: r-rbowtie: updating from version 1.38.0 to version 1.40.0... gnu/packages/bioconductor.scm:14392:12: r-rbowtie: consider removing this input: zlib gnu/packages/bioconductor.scm:14625:13: r-multidataset: updating from version 1.26.0 to version 1.28.0... gnu/packages/bioconductor.scm:17060:13: r-ebarrays: updating from version 2.62.0 to version 2.64.0... gnu/packages/bioconductor.scm:13245:13: r-genomicscores: updating from version 2.10.0 to version 2.12.0... gnu/packages/bioconductor.scm:2929:13: r-annotationhubdata: updating from version 1.28.0 to version 1.30.0... gnu/packages/bioconductor.scm:8806:13: r-shinymethyl: updating from version 1.34.0 to version 1.36.0... gnu/packages/bioconductor.scm:8816:5: r-shinymethyl: consider adding this propagated input: r-biobase gnu/packages/bioconductor.scm:8816:5: r-shinymethyl: consider adding this propagated input: r-htmltools gnu/packages/bioconductor.scm:8816:5: r-shinymethyl: consider adding this propagated input: r-matrixgenerics gnu/packages/bioconductor.scm:8816:5: r-shinymethyl: consider removing this propagated input: r-illuminahumanmethylation450kmanifest gnu/packages/bioconductor.scm:8816:5: r-shinymethyl: consider removing this propagated input: r-matrixstats gnu/packages/bioconductor.scm:7069:13: r-rhtslib: updating from version 2.0.0 to version 2.2.0... guix refresh: r-rhtslib: consider adding this input: curl guix refresh: r-rhtslib: consider adding this input: zlib gnu/packages/bioconductor.scm:7083:5: r-rhtslib: consider removing this propagated input: curl gnu/packages/bioconductor.scm:7083:5: r-rhtslib: consider removing this propagated input: zlib gnu/packages/bioconductor.scm:5780:13: r-biocparallel: updating from version 1.32.6 to version 1.34.0... gnu/packages/bioconductor.scm:7118:13: r-interactivedisplaybase: updating from version 1.36.0 to version 1.38.0... gnu/packages/bioconductor.scm:8686:13: r-scmap: updating from version 1.20.2 to version 1.22.0... gnu/packages/bioconductor.scm:18572:13: r-scran: updating from version 1.26.2 to version 1.28.0... gnu/packages/bioconductor.scm:3416:13: r-asafe: updating from version 1.24.0 to version 1.26.0... gnu/packages/bioconductor.scm:16556:13: r-bgmix: updating from version 1.58.0 to version 1.59.0... gnu/packages/bioconductor.scm:4856:12: r-bluster: updating from version 1.8.0 to version 1.10.0... gnu/packages/bioconductor.scm:6604:13: r-fastseg: updating from version 1.44.0 to version 1.46.0... gnu/packages/bioconductor.scm:6098:13: r-complexheatmap: updating from version 2.14.0 to version 2.16.0... gnu/packages/bioconductor.scm:16412:13: r-acgh: updating from version 1.76.0 to version 1.78.0... gnu/packages/bioconductor.scm:18705:13: r-msfeatures: updating from version 1.6.0 to version 1.8.0... gnu/packages/bioconductor.scm:9819:12: r-apeglm: updating from version 1.20.0 to version 1.22.0... gnu/packages/bioconductor.scm:9835:18: r-apeglm: consider adding this native input: r-rmarkdown gnu/packages/bioconductor.scm:15919:13: r-bigmelon: updating from version 1.24.0 to version 1.26.0... gnu/packages/bioconductor.scm:15939:5: r-bigmelon: consider removing this native input: r-knitr gnu/packages/bioconductor.scm:19384:13: r-snpstats: updating from version 1.48.0 to version 1.50.0... gnu/packages/bioconductor.scm:19394:12: r-snpstats: consider removing this input: zlib gnu/packages/bioconductor.scm:20291:13: r-dada2: updating from version 1.26.0 to version 1.28.0... gnu/packages/bioconductor.scm:20076:13: r-bionet: updating from version 1.58.0 to version 1.60.0... gnu/packages/bioconductor.scm:18102:13: r-rhdf5lib: updating from version 1.20.0 to version 1.22.0... guix refresh: r-rhdf5lib: consider adding this input: curl guix refresh: r-rhdf5lib: consider adding this input: openssl guix refresh: r-rhdf5lib: consider adding this input: zlib gnu/packages/bioconductor.scm:18171:5: r-rhdf5lib: consider removing this native input: hdf5-source gnu/packages/bioconductor.scm:18169:5: r-rhdf5lib: consider removing this propagated input: hdf5 gnu/packages/bioconductor.scm:18169:5: r-rhdf5lib: consider removing this propagated input: zlib gnu/packages/bioconductor.scm:13163:12: r-motifbreakr: updating from version 2.12.3 to version 2.13.7... gnu/packages/bioconductor.scm:4482:13: r-decomptumor2sig: updating from version 2.14.0 to version 2.16.0... gnu/packages/bioconductor.scm:4491:12: r-decomptumor2sig: consider removing this input: perl gnu/packages/bioconductor.scm:14252:13: r-progeny: updating from version 1.20.0 to version 1.22.0... gnu/packages/bioconductor.scm:13845:13: r-yarn: updating from version 1.24.0 to version 1.26.0... gnu/packages/bioconductor.scm:16640:13: r-bicare: updating from version 1.56.0 to version 1.58.0... gnu/packages/bioconductor.scm:16651:5: r-bicare: consider adding this propagated input: r-go-db gnu/packages/bioconductor.scm:12621:13: r-dose: updating from version 3.24.2 to version 3.26.0... gnu/packages/bioconductor.scm:10194:12: r-matrixgenerics: updating from version 1.10.0 to version 1.12.0... gnu/packages/bioconductor.scm:10558:13: r-glimma: updating from version 2.8.0 to version 2.10.0... gnu/packages/bioconductor.scm:10577:5: r-glimma: consider adding this native input: esbuild gnu/packages/bioconductor.scm:7385:13: r-metagenomeseq: updating from version 1.40.0 to version 1.42.0... gnu/packages/bioconductor.scm:18071:13: r-hdf5array: updating from version 1.26.0 to version 1.28.0... gnu/packages/bioconductor.scm:18082:5: r-hdf5array: consider removing this input: zlib gnu/packages/bioconductor.scm:9556:13: r-xvector: updating from version 0.38.0 to version 0.40.0... gnu/packages/bioconductor.scm:9577:5: r-xvector: consider removing this input: zlib gnu/packages/bioconductor.scm:9579:5: r-xvector: consider adding this propagated input: r-zlibbioc gnu/packages/bioconductor.scm:15863:13: r-gdsfmt: updating from version 1.34.1 to version 1.36.0... gnu/packages/bioconductor.scm:15896:5: r-gdsfmt: consider removing this input: lz4 gnu/packages/bioconductor.scm:15896:5: r-gdsfmt: consider removing this input: xz gnu/packages/bioconductor.scm:15896:5: r-gdsfmt: consider removing this input: zlib gnu/packages/bioconductor.scm:2090:13: r-adacgh2: updating from version 2.38.0 to version 2.40.0... gnu/packages/bioconductor.scm:2107:12: r-adacgh2: consider removing this input: python-wrapper gnu/packages/bioconductor.scm:8760:13: r-seqlogo: updating from version 1.64.0 to version 1.66.0... gnu/packages/bioconductor.scm:3261:13: r-aneufinder: updating from version 1.26.0 to version 1.28.0... gnu/packages/bioconductor.scm:3272:5: r-aneufinder: consider removing this propagated input: r-reordercluster gnu/packages/bioconductor.scm:5281:13: r-affycomp: updating from version 1.74.0 to version 1.76.0... gnu/packages/bioconductor.scm:17373:13: r-biocor: updating from version 1.22.0 to version 1.24.0... gnu/packages/bioconductor.scm:5963:13: r-champ: updating from version 2.28.0 to version 2.30.0... gnu/packages/bioconductor.scm:19973:13: r-biomvcclass: updating from version 1.66.0 to version 1.68.0... gnu/packages/bioconductor.scm:20448:13: r-biscuiteer: updating from version 1.12.0 to version 1.14.0... gnu/packages/bioconductor.scm:6776:13: r-genomicalignments: updating from version 1.34.1 to version 1.36.0... gnu/packages/bioconductor.scm:11720:13: r-scdd: updating from version 1.22.0 to version 1.24.0... gnu/packages/bioconductor.scm:18276:13: r-tfbstools: updating from version 1.36.0 to version 1.38.0... gnu/packages/bioconductor.scm:19670:13: r-biobtreer: updating from version 1.10.0 to version 1.12.0... gnu/packages/bioconductor.scm:9666:13: r-oligoclasses: updating from version 1.60.0 to version 1.62.0... gnu/packages/bioconductor.scm:11315:13: r-ihw: updating from version 1.26.0 to version 1.28.0... gnu/packages/bioconductor.scm:6659:13: r-genefilter: updating from version 1.80.3 to version 1.82.0... gnu/packages/bioconductor.scm:6671:5: r-genefilter: consider adding this propagated input: r-matrixgenerics gnu/packages/bioconductor.scm:6671:5: r-genefilter: consider removing this propagated input: r-biocgenerics gnu/packages/bioconductor.scm:17328:13: r-bioconcotk: updating from version 1.18.0 to version 1.20.0... gnu/packages/bioconductor.scm:17339:5: r-bioconcotk: consider adding this propagated input: r-mass gnu/packages/bioconductor.scm:6559:13: r-ensembldb: updating from version 2.22.0 to version 2.24.0... gnu/packages/bioconductor.scm:6517:13: r-enmix: updating from version 1.34.02 to version 1.36.0... gnu/packages/bioconductor.scm:7770:13: r-msnid: updating from version 1.32.0 to version 1.34.0... gnu/packages/bioconductor.scm:15050:13: r-ggcyto: updating from version 1.26.4 to version 1.28.0... gnu/packages/bioconductor.scm:12957:13: r-a4base: updating from version 1.46.0 to version 1.48.0... gnu/packages/bioconductor.scm:11058:13: r-chipexoqual: updating from version 1.22.0 to version 1.24.0... gnu/packages/bioconductor.scm:13283:13: r-atacseqqc: updating from version 1.22.0 to version 1.24.0... gnu/packages/bioconductor.scm:3571:13: r-assessorf: updating from version 1.16.0 to version 1.18.0... gnu/packages/bioconductor.scm:14872:13: r-consensusclusterplus: updating from version 1.62.0 to version 1.64.0... gnu/packages/bioconductor.scm:10928:13: r-metapod: updating from version 1.6.0 to version 1.8.0... gnu/packages/bioconductor.scm:18228:13: r-cner: updating from version 1.34.0 to version 1.36.0... gnu/packages/bioconductor.scm:18237:12: r-cner: consider removing this input: zlib gnu/packages/bioconductor.scm:16311:13: r-unifiedwmwqpcr: updating from version 1.34.0 to version 1.36.0... gnu/packages/bioconductor.scm:19140:13: r-gwascat: updating from version 2.30.0 to version 2.32.0... gnu/packages/bioconductor.scm:18768:13: r-msmseda: updating from version 1.36.0 to version 1.38.0... gnu/packages/bioconductor.scm:8289:13: r-regioner: updating from version 1.30.0 to version 1.32.0... gnu/packages/bioconductor.scm:9252:13: r-systempiper: updating from version 2.4.0 to version 2.6.0... gnu/packages/bioconductor.scm:14529:13: r-rqc: updating from version 1.32.0 to version 1.34.0... gnu/packages/bioconductor.scm:5412:13: r-affyio: updating from version 1.68.0 to version 1.70.0... gnu/packages/bioconductor.scm:7598:13: r-muscat: updating from version 1.12.1 to version 1.14.0... gnu/packages/bioconductor.scm:13730:13: r-gcrma: updating from version 2.70.0 to version 2.72.0... gnu/packages/bioconductor.scm:3096:13: r-alphabeta: updating from version 1.12.0 to version 1.14.0... gnu/packages/bioconductor.scm:5464:13: r-annotate: updating from version 1.76.0 to version 1.78.0... gnu/packages/bioconductor.scm:13544:13: r-ebimage: updating from version 4.40.1 to version 4.42.0... gnu/packages/bioconductor.scm:13213:13: r-motifstack: updating from version 1.42.0 to version 1.44.0... gnu/packages/bioconductor.scm:13231:5: r-motifstack: consider adding this native input: esbuild gnu/packages/bioconductor.scm:11802:13: r-geoquery: updating from version 2.66.0 to version 2.68.0... gnu/packages/bioconductor.scm:7694:13: r-msa: updating from version 1.30.1 to version 1.32.0... gnu/packages/bioconductor.scm:8320:13: r-reportingtools: updating from version 2.38.0 to version 2.39.0... gnu/packages/bioconductor.scm:8352:5: r-reportingtools: consider adding this native input: esbuild gnu/packages/bioconductor.scm:8352:5: r-reportingtools: consider adding this native input: r-utils gnu/packages/bioconductor.scm:16868:13: r-chemminer: updating from version 3.50.0 to version 3.52.0... gnu/packages/bioconductor.scm:6914:13: r-glad: updating from version 2.62.0 to version 2.64.0... gnu/packages/bioconductor.scm:10278:13: r-qdnaseq: updating from version 1.34.0 to version 1.36.0... gnu/packages/bioconductor.scm:16614:13: r-bhc: updating from version 1.50.0 to version 1.52.0... gnu/packages/bioconductor.scm:14080:13: r-wiggleplotr: updating from version 1.22.0 to version 1.24.0... gnu/packages/bioconductor.scm:6072:13: r-chipseq: updating from version 1.48.0 to version 1.50.0... guix refresh: r-chipseq: consider adding this native input: r-knitr gnu/packages/bioconductor.scm:2215:13: r-adimpute: updating from version 1.8.0 to version 1.10.0... gnu/packages/bioconductor.scm:11381:13: r-residualmatrix: updating from version 1.8.0 to version 1.10.0... gnu/packages/bioconductor.scm:4003:13: r-banocc: updating from version 1.22.0 to version 1.24.0... gnu/packages/bioconductor.scm:5831:13: r-biostrings: updating from version 2.66.0 to version 2.68.0... gnu/packages/bioconductor.scm:20635:13: r-phyloseq: updating from version 1.42.0 to version 1.44.0... gnu/packages/bioconductor.scm:4344:13: r-debcam: updating from version 1.16.0 to version 1.18.0... gnu/packages/bioconductor.scm:12823:13: r-annaffy: updating from version 1.70.0 to version 1.72.0... gnu/packages/bioconductor.scm:9529:13: r-xmapbridge: updating from version 1.56.0 to version 1.58.0... gnu/packages/bioconductor.scm:19198:13: r-ldblock: updating from version 1.28.0 to version 1.30.0... gnu/packages/bioconductor.scm:19208:5: r-ldblock: consider adding this propagated input: r-rlang gnu/packages/bioconductor.scm:19208:5: r-ldblock: consider removing this propagated input: r-ensdb-hsapiens-v75 gnu/packages/bioconductor.scm:19208:5: r-ldblock: consider removing this propagated input: r-ensembldb gnu/packages/bioconductor.scm:19208:5: r-ldblock: consider removing this propagated input: r-genomeinfodb gnu/packages/bioconductor.scm:19208:5: r-ldblock: consider removing this propagated input: r-genomicfiles gnu/packages/bioconductor.scm:19208:5: r-ldblock: consider removing this propagated input: r-rsamtools gnu/packages/bioconductor.scm:19208:5: r-ldblock: consider removing this propagated input: r-snpstats gnu/packages/bioconductor.scm:19208:5: r-ldblock: consider removing this propagated input: r-variantannotation gnu/packages/bioconductor.scm:13950:13: r-massspecwavelet: updating from version 1.64.1 to version 1.66.0... gnu/packages/bioconductor.scm:2563:13: r-agimicrorna: updating from version 2.48.0 to version 2.50.0... gnu/packages/bioconductor.scm:3489:13: r-asics: updating from version 2.14.0 to version 2.16.0... gnu/packages/bioconductor.scm:15181:13: r-flowworkspace: updating from version 4.10.1 to version 4.12.0... gnu/packages/bioconductor.scm:16578:13: r-bgx: updating from version 1.64.0 to version 1.66.0... gnu/packages/bioconductor.scm:16599:5: r-bgx: consider removing this input: boost gnu/packages/bioconductor.scm:16603:5: r-bgx: consider removing this native input: autoconf gnu/packages/bioconductor.scm:16603:5: r-bgx: consider removing this native input: automake gnu/packages/bioconductor.scm:12879:13: r-a4classif: updating from version 1.46.0 to version 1.48.0... gnu/packages/bioconductor.scm:12049:13: r-minfi: updating from version 1.44.0 to version 1.46.0... gnu/packages/bioconductor.scm:2320:13: r-affyilm: updating from version 1.50.0 to version 1.52.0... gnu/packages/bioconductor.scm:4305:13: r-dearseq: updating from version 1.10.0 to version 1.12.0... gnu/packages/bioconductor.scm:11118:13: r-dnacopy: updating from version 1.72.3 to version 1.74.0... gnu/packages/bioconductor.scm:15266:13: r-opencyto: updating from version 2.10.1 to version 2.12.0... gnu/packages/bioconductor.scm:13583:13: r-yamss: updating from version 1.24.0 to version 1.26.0... gnu/packages/bioconductor.scm:11453:13: r-mast: updating from version 1.24.1 to version 1.26.0... gnu/packages/bioconductor.scm:11489:5: r-mast: consider removing this native input: js-jquery-sticky-kit gnu/packages/bioconductor.scm:11476:5: r-mast: consider adding this propagated input: r-matrix gnu/packages/bioconductor.scm:7502:13: r-mmuphin: updating from version 1.12.1 to version 1.14.0... guix refresh: r-mmuphin: consider adding this input: glpk gnu/packages/bioconductor.scm:7544:5: r-mmuphin: consider removing this propagated input: r-biocstyle gnu/packages/bioconductor.scm:15803:13: r-roc: updating from version 1.74.0 to version 1.76.0... guix refresh: r-roc: consider adding this propagated input: r-knitr gnu/packages/bioconductor.scm:14284:13: r-arrmnormalization: updating from version 1.38.0 to version 1.40.0... gnu/packages/bioconductor.scm:9609:13: r-zellkonverter: updating from version 1.8.0 to version 1.10.0... gnu/packages/bioconductor.scm:8015:13: r-organismdbi: updating from version 1.40.0 to version 1.42.0... guix refresh: r-organismdbi: consider adding this native input: r-knitr gnu/packages/bioconductor.scm:5901:13: r-bsgenome: updating from version 1.66.3 to version 1.68.0... gnu/packages/bioconductor.scm:2787:13: r-anaquin: updating from version 2.22.0 to version 2.24.0... gnu/packages/bioconductor.scm:19566:13: r-beclear: updating from version 2.14.0 to version 2.16.0... gnu/packages/bioconductor.scm:18460:13: r-singler: updating from version 2.0.0 to version 2.2.0... gnu/packages/bioconductor.scm:20245:13: r-bsseq: updating from version 1.34.0 to version 1.36.0... gnu/packages/bioconductor.scm:2061:13: r-absseq: updating from version 1.52.0 to version 1.54.0... gnu/packages/bioconductor.scm:19879:13: r-biodb: updating from version 1.6.1 to version 1.8.0... gnu/packages/bioconductor.scm:4910:13: r-infercnv: updating from version 1.14.2 to version 1.16.0... gnu/packages/bioconductor.scm:4920:12: r-infercnv: consider removing this input: python gnu/packages/bioconductor.scm:18923:13: r-ggbio: updating from version 1.46.0 to version 1.48.0... gnu/packages/bioconductor.scm:4755:13: r-dmrcate: updating from version 2.12.0 to version 2.14.0... gnu/packages/bioconductor.scm:4998:13: r-isoformswitchanalyzer: updating from version 1.20.0 to version 1.21.0... gnu/packages/bioconductor.scm:2410:13: r-affyrnadegradation: updating from version 1.44.0 to version 1.46.0... gnu/packages/bioconductor.scm:14487:13: r-quasr: updating from version 1.38.0 to version 1.40.0... gnu/packages/bioconductor.scm:9328:13: r-tximport: updating from version 1.26.1 to version 1.28.0... gnu/packages/bioconductor.scm:11694:13: r-noiseq: updating from version 2.42.0 to version 2.44.0... gnu/packages/bioconductor.scm:7353:13: r-maser: updating from version 1.16.0 to version 1.18.0... gnu/packages/bioconductor.scm:17155:13: r-biocgraph: updating from version 1.60.0 to version 1.62.0... gnu/packages/bioconductor.scm:20173:13: r-biotip: updating from version 1.12.0 to version 1.14.0... gnu/packages/bioconductor.scm:8967:13: r-trajectoryutils: updating from version 1.6.0 to version 1.8.0... gnu/packages/bioconductor.scm:15489:13: r-rcistarget: updating from version 1.18.2 to version 1.20.0... gnu/packages/bioconductor.scm:16975:13: r-biobroom: updating from version 1.30.0 to version 1.32.0... gnu/packages/bioconductor.scm:10368:13: r-riboprofiling: updating from version 1.28.0 to version 1.30.0... gnu/packages/bioconductor.scm:10825:13: r-treeio: updating from version 1.22.0 to version 1.24.0... gnu/packages/bioconductor.scm:10836:5: r-treeio: consider adding this propagated input: r-cli gnu/packages/bioconductor.scm:4552:13: r-decontam: updating from version 1.18.0 to version 1.20.0... gnu/packages/bioconductor.scm:5347:13: r-affycontam: updating from version 1.56.0 to version 1.58.0... gnu/packages/bioconductor.scm:6853:13: r-genomicfiles: updating from version 1.34.0 to version 1.36.0... guix refresh: r-genomicfiles: consider adding this native input: r-knitr gnu/packages/bioconductor.scm:8833:13: r-shortread: updating from version 1.56.1 to version 1.58.0... gnu/packages/bioconductor.scm:10591:13: r-glmgampoi: updating from version 1.10.2 to version 1.12.0... gnu/packages/bioconductor.scm:10601:5: r-glmgampoi: consider adding this propagated input: r-vctrs gnu/packages/bioconductor.scm:11916:13: r-mia: updating from version 1.6.0 to version 1.8.0... gnu/packages/bioconductor.scm:13330:13: r-gofuncr: updating from version 1.18.0 to version 1.20.0... gnu/packages/bioconductor.scm:3303:13: r-anf: updating from version 1.20.0 to version 1.22.0... gnu/packages/bioconductor.scm:12412:13: r-varianttools: updating from version 1.40.0 to version 1.42.0... gnu/packages/bioconductor.scm:20203:13: r-biotmle: updating from version 1.22.0 to version 1.24.0... gnu/packages/bioconductor.scm:6962:13: r-gostats: updating from version 2.64.0 to version 2.66.0... guix refresh: r-gostats: consider adding this native input: r-knitr gnu/packages/bioconductor.scm:14662:13: r-ropls: updating from version 1.30.0 to version 1.32.0... gnu/packages/bioconductor.scm:14114:13: r-widgettools: updating from version 1.76.0 to version 1.78.0... gnu/packages/bioconductor.scm:12247:13: r-ioniser: updating from version 2.22.0 to version 2.24.0... gnu/packages/bioconductor.scm:17400:13: r-biocpkgtools: updating from version 1.16.1 to version 1.18.0... guix refresh: r-biocpkgtools: consider adding this input: mailsend-go gnu/packages/bioconductor.scm:17467:5: r-biocpkgtools: consider removing this native input: js-bootstrap gnu/packages/bioconductor.scm:17467:5: r-biocpkgtools: consider removing this native input: js-d3 gnu/packages/bioconductor.scm:17467:5: r-biocpkgtools: consider removing this native input: js-jquery gnu/packages/bioconductor.scm:17467:5: r-biocpkgtools: consider removing this native input: js-underscore gnu/packages/bioconductor.scm:7207:13: r-maaslin2: updating from version 1.12.0 to version 1.13.0... gnu/packages/bioconductor.scm:7234:5: r-maaslin2: consider removing this propagated input: r-mumin gnu/packages/bioconductor.scm:7234:5: r-maaslin2: consider removing this propagated input: r-rmarkdown gnu/packages/bioconductor.scm:10018:13: r-graph: updating from version 1.76.0 to version 1.78.0... guix refresh: r-graph: consider adding this native input: r-knitr gnu/packages/bioconductor.scm:7827:13: r-mzid: updating from version 1.36.0 to version 1.38.0... gnu/packages/bioconductor.scm:15397:13: r-mixomics: updating from version 6.22.0 to version 6.24.0... gnu/packages/bioconductor.scm:17943:13: r-rgraphviz: updating from version 2.42.0 to version 2.44.0... gnu/packages/bioconductor.scm:6492:13: r-edger: updating from version 3.40.2 to version 3.42.0... gnu/packages/bioconductor.scm:15974:13: r-reqon: updating from version 1.44.0 to version 1.46.0... gnu/packages/bioconductor.scm:4031:13: r-barcodetrackr: updating from version 1.6.0 to version 1.8.0... gnu/packages/bioconductor.scm:13974:13: r-xcms: updating from version 3.20.0 to version 3.22.0... gnu/packages/bioconductor.scm:13984:5: r-xcms: consider adding this propagated input: r-multtest gnu/packages/bioconductor.scm:3757:13: r-awst: updating from version 1.6.0 to version 1.8.0... gnu/packages/bioconductor.scm:19924:13: r-biomformat: updating from version 1.26.0 to version 1.28.0... gnu/packages/bioconductor.scm:18432:13: r-singlecellexperiment: updating from version 1.20.1 to version 1.22.0... gnu/packages/bioconductor.scm:10719:13: r-dnabarcodes: updating from version 1.28.0 to version 1.30.0... gnu/packages/bioconductor.scm:2462:13: r-aggregatebiovar: updating from version 1.8.0 to version 1.10.0... gnu/packages/bioconductor.scm:4664:13: r-deepsnv: updating from version 1.44.0 to version 1.46.0... gnu/packages/bioconductor.scm:17230:13: r-experimenthub: updating from version 2.6.0 to version 2.8.0... gnu/packages/bioconductor.scm:17241:5: r-experimenthub: consider removing this propagated input: r-curl gnu/packages/bioconductor.scm:2132:13: r-adam: updating from version 1.14.0 to version 1.16.0... gnu/packages/bioconductor.scm:12147:13: r-lumi: updating from version 2.50.0 to version 2.52.0... gnu/packages/bioconductor.scm:6631:13: r-gage: updating from version 2.48.0 to version 2.50.0... gnu/packages/bioconductor.scm:9424:13: r-vsn: updating from version 3.66.0 to version 3.68.0... gnu/packages/bioconductor.scm:10992:13: r-destiny: updating from version 3.12.0 to version 3.14.0... gnu/packages/bioconductor.scm:11025:5: r-destiny: consider removing this native input: r-nbconvertr gnu/packages/bioconductor.scm:10437:13: r-interactionset: updating from version 1.26.1 to version 1.28.0... gnu/packages/bioconductor.scm:9873:13: r-diffbind: updating from version 3.8.4 to version 3.10.0... gnu/packages/bioconductor.scm:7330:13: r-manor: updating from version 1.70.0 to version 1.72.0... gnu/packages/bioconductor.scm:2688:13: r-amplican: updating from version 1.20.0 to version 1.21.0... gnu/packages/bioconductor.scm:2435:13: r-agdex: updating from version 1.46.0 to version 1.48.0... gnu/packages/bioconductor.scm:4700:13: r-delayedarray: updating from version 0.24.0 to version 0.25.0... gnu/packages/bioconductor.scm:18615:13: r-sparsematrixstats: updating from version 1.10.0 to version 1.12.0... gnu/packages/bioconductor.scm:2593:13: r-aims: updating from version 1.30.0 to version 1.32.0... gnu/packages/bioconductor.scm:3784:13: r-baalchip: updating from version 1.24.0 to version 1.26.0... gnu/packages/bioconductor.scm:3793:12: r-baalchip: consider removing this input: perl gnu/packages/bioconductor.scm:5370:13: r-affycoretools: updating from version 1.70.0 to version 1.72.0... gnu/packages/bioconductor.scm:14015:13: r-wppi: updating from version 1.6.0 to version 1.8.0... gnu/packages/bioconductor.scm:19600:13: r-bgeecall: updating from version 1.14.0 to version 1.16.0... guix refresh: r-bgeecall: consider adding this input: kallisto gnu/packages/bioconductor.scm:19611:5: r-bgeecall: consider removing this propagated input: kallisto gnu/packages/bioconductor.scm:18791:13: r-msmstests: updating from version 1.36.0 to version 1.38.0... gnu/packages/bioconductor.scm:7098:13: r-impute: updating from version 1.72.3 to version 1.74.0... gnu/packages/bioconductor.scm:19694:13: r-minet: updating from version 3.56.0 to version 3.58.0... gnu/packages/bioconductor.scm:12452:13: r-heatplus: updating from version 3.6.0 to version 3.8.0... gnu/packages/bioconductor.scm:18018:13: r-fithic: updating from version 1.24.0 to version 1.26.0... gnu/packages/bioconductor.scm:9641:13: r-geneplotter: updating from version 1.76.0 to version 1.78.0... gnu/packages/bioconductor.scm:3702:13: r-attract: updating from version 1.50.0 to version 1.52.0... gnu/packages/bioconductor.scm:8994:13: r-scds: updating from version 1.14.0 to version 1.16.0... gnu/packages/bioconductor.scm:17855:13: r-preprocesscore: updating from version 1.60.2 to version 1.62.0... gnu/packages/bioconductor.scm:5546:13: r-annotationforge: updating from version 1.40.2 to version 1.42.0... gnu/packages/bioconductor.scm:5073:13: r-italics: updating from version 2.58.0 to version 2.60.0... gnu/packages/bioconductor.scm:18492:13: r-scuttle: updating from version 1.8.4 to version 1.10.0... gnu/packages/bioconductor.scm:9094:13: r-stager: updating from version 1.20.0 to version 1.22.0... gnu/packages/bioconductor.scm:17082:13: r-biocbaseutils: updating from version 1.0.0 to version 1.2.0... gnu/packages/bioconductor.scm:13616:13: r-gtrellis: updating from version 1.30.0 to version 1.32.0... gnu/packages/bioconductor.scm:5673:13: r-biobase: updating from version 2.58.0 to version 2.60.0... guix refresh: r-biobase: consider adding this native input: r-knitr gnu/packages/bioconductor.scm:7274:13: r-made4: updating from version 1.72.0 to version 1.74.0... gnu/packages/bioconductor.scm:7022:13: r-harshlight: updating from version 1.70.0 to version 1.72.0... gnu/packages/bioconductor.scm:6025:13: r-chipseeker: updating from version 1.34.1 to version 1.36.0... gnu/packages/bioconductor.scm:6036:5: r-chipseeker: consider adding this propagated input: r-aplot gnu/packages/bioconductor.scm:6036:5: r-chipseeker: consider adding this propagated input: r-tibble gnu/packages/bioconductor.scm:6036:5: r-chipseeker: consider adding this propagated input: r-yulab-utils gnu/packages/bioconductor.scm:6036:5: r-chipseeker: consider removing this propagated input: r-ggvenndiagram gnu/packages/bioconductor.scm:6036:5: r-chipseeker: consider removing this propagated input: r-rcolorbrewer gnu/packages/bioconductor.scm:7303:13: r-makecdfenv: updating from version 1.74.0 to version 1.76.0... gnu/packages/bioconductor.scm:2496:13: r-agilp: updating from version 3.30.0 to version 3.32.0... gnu/packages/bioconductor.scm:16940:13: r-bioassayr: updating from version 1.36.0 to version 1.38.0... gnu/packages/bioconductor.scm:13882:13: r-roar: updating from version 1.34.0 to version 1.36.0... gnu/packages/bioconductor.scm:2617:13: r-airpart: updating from version 1.6.0 to version 1.8.0... gnu/packages/bioconductor.scm:19356:13: r-snapcgh: updating from version 1.68.0 to version 1.70.0... gnu/packages/bioconductor.scm:17653:13: r-rgreat: updating from version 2.0.2 to version 2.2.0... gnu/packages/bioconductor.scm:4073:13: r-biocversion: updating from version 3.16.0 to version 3.17.1... gnu/packages/bioconductor.scm:15087:13: r-flowviz: updating from version 1.62.0 to version 1.64.0... gnu/packages/bioconductor.scm:2817:13: r-ancombc: updating from version 2.0.2 to version 2.2.0... gnu/packages/bioconductor.scm:8876:13: r-simplifyenrichment: updating from version 1.8.0 to version 1.10.0... gnu/packages/bioconductor.scm:11858:13: r-siggenes: updating from version 1.72.0 to version 1.74.0... gnu/packages/bioconductor.scm:8217:13: r-rbgl: updating from version 1.74.0 to version 1.76.0... guix refresh: r-rbgl: consider adding this native input: r-knitr gnu/packages/bioconductor.scm:2518:13: r-adductomicsr: updating from version 1.14.0 to version 1.16.0... gnu/packages/bioconductor.scm:13812:13: r-quantro: updating from version 1.32.0 to version 1.34.0... gnu/packages/bioconductor.scm:19499:13: r-ballgown: updating from version 2.30.0 to version 2.32.0... gnu/packages/bioconductor.scm:9493:13: r-xina: updating from version 1.16.0 to version 1.18.0... gnu/packages/bioconductor.scm:19174:13: r-kegggraph: updating from version 1.58.3 to version 1.60.0... gnu/packages/bioconductor.scm:9386:13: r-variantannotation: updating from version 1.44.1 to version 1.46.0... gnu/packages/bioconductor.scm:8370:13: r-rhdf5: updating from version 2.42.1 to version 2.44.0... gnu/packages/bioconductor.scm:4730:13: r-derfinderhelper: updating from version 1.32.0 to version 1.34.0... gnu/packages/bioconductor.scm:17027:13: r-reactomepa: updating from version 1.42.0 to version 1.44.0... gnu/packages/bioconductor.scm:2664:13: r-amountain: updating from version 1.24.0 to version 1.26.0... gnu/packages/bioconductor.scm:16825:13: r-bigpint: updating from version 1.14.0 to version 1.15.0... gnu/packages/bioconductor.scm:14938:13: r-cytolib: updating from version 2.10.1 to version 2.12.0... gnu/packages/bioconductor.scm:8047:13: r-oscope: updating from version 1.28.0 to version 1.30.0... gnu/packages/bioconductor.scm:14135:13: r-webbioc: updating from version 1.70.0 to version 1.72.0... gnu/packages/bioconductor.scm:14145:5: r-webbioc: consider adding this input: unix gnu/packages/bioconductor.scm:12909:13: r-a4preproc: updating from version 1.46.0 to version 1.48.0... gnu/packages/bioconductor.scm:9221:13: r-sva: updating from version 3.46.0 to version 3.48.0... gnu/packages/bioconductor.scm:2167:13: r-adamgui: updating from version 1.14.0 to version 1.16.0... gnu/packages/bioconductor.scm:18205:13: r-beadarraysnp: updating from version 1.64.0 to version 1.66.0... gnu/packages/bioconductor.scm:16911:13: r-fmcsr: updating from version 1.40.0 to version 1.42.0... gnu/packages/bioconductor.scm:2735:13: r-amaretto: updating from version 1.14.0 to version 1.16.0... gnu/packages/bioconductor.scm:9764:13: r-qvalue: updating from version 2.30.0 to version 2.32.0... gnu/packages/bioconductor.scm:8604:13: r-scdblfinder: updating from version 1.12.0 to version 1.14.0... gnu/packages/bioconductor.scm:19322:13: r-pathview: updating from version 1.38.0 to version 1.40.0... gnu/packages/bioconductor.scm:10649:13: r-plgem: updating from version 1.70.0 to version 1.72.0... gnu/packages/bioconductor.scm:19741:13: r-dir-expiry: updating from version 1.6.0 to version 1.8.0... gnu/packages/bioconductor.scm:19849:13: r-biocdockermanager: updating from version 1.10.0 to version 1.11.0... guix refresh: r-biocdockermanager: consider adding this input: docker gnu/packages/bioconductor.scm:19861:5: r-biocdockermanager: consider removing this propagated input: docker gnu/packages/bioconductor.scm:7049:13: r-hpar: updating from version 1.40.0 to version 1.42.0... guix refresh: r-hpar: consider adding this propagated input: r-experimenthub gnu/packages/bioconductor.scm:17732:13: r-icens: updating from version 1.70.0 to version 1.72.0... gnu/packages/bioconductor.scm:8239:13: r-rcas: updating from version 1.24.0 to version 1.26.0... guix refresh: r-rcas: consider adding this input: pandoc gnu/packages/bioconductor.scm:8249:5: r-rcas: consider removing this propagated input: pandoc gnu/packages/bioconductor.scm:3669:13: r-atsnp: updating from version 1.14.0 to version 1.16.0... gnu/packages/bioconductor.scm:19533:13: r-megadepth: updating from version 1.8.0 to version 1.9.0... gnu/packages/bioconductor.scm:7143:13: r-keggrest: updating from version 1.38.0 to version 1.40.0... gnu/packages/bioconductor.scm:20555:13: r-tricycle: updating from version 1.6.0 to version 1.8.0... gnu/packages/bioconductor.scm:19789:13: r-basilisk: updating from version 1.10.2 to version 1.12.0... gnu/packages/bioconductor.scm:3021:13: r-aldex2: updating from version 1.30.0 to version 1.32.0... gnu/packages/bioconductor.scm:6809:13: r-genomicfeatures: updating from version 1.50.4 to version 1.52.0... gnu/packages/bioconductor.scm:12696:13: r-clusterprofiler: updating from version 4.6.2 to version 4.8.0... gnu/packages/bioconductor.scm:15443:13: r-depecher: updating from version 1.14.0 to version 1.16.0... gnu/packages/bioconductor.scm:19815:13: r-biocthis: updating from version 1.8.3 to version 1.10.0... gnu/packages/bioconductor.scm:6260:13: r-deseq2: updating from version 1.38.3 to version 1.40.0... gnu/packages/bioconductor.scm:6285:5: r-deseq2: consider adding this native input: r-rmarkdown gnu/packages/bioconductor.scm:6271:5: r-deseq2: consider removing this propagated input: r-geneplotter gnu/packages/bioconductor.scm:4886:13: r-ideoviz: updating from version 1.34.0 to version 1.36.0... gnu/packages/bioconductor.scm:12477:13: r-gosemsim: updating from version 2.24.0 to version 2.26.0... gnu/packages/bioconductor.scm:9701:13: r-oligo: updating from version 1.62.2 to version 1.64.0... gnu/packages/bioconductor.scm:9711:12: r-oligo: consider removing this input: zlib gnu/packages/bioconductor.scm:2035:13: r-abarray: updating from version 1.66.0 to version 1.68.0... gnu/packages/bioconductor.scm:3391:13: r-arrayexpress: updating from version 1.57.0 to version 1.60.0... gnu/packages/bioconductor.scm:3401:5: r-arrayexpress: consider adding this propagated input: r-httr gnu/packages/bioconductor.scm:3401:5: r-arrayexpress: consider adding this propagated input: r-jsonlite gnu/packages/bioconductor.scm:3401:5: r-arrayexpress: consider adding this propagated input: r-rlang gnu/packages/bioconductor.scm:3401:5: r-arrayexpress: consider removing this propagated input: r-xml gnu/packages/bioconductor.scm:6408:13: r-dittoseq: updating from version 1.10.0 to version 1.12.0... gnu/packages/bioconductor.scm:7648:13: r-mutationalpatterns: updating from version 3.8.1 to version 3.10.0... gnu/packages/bioconductor.scm:7660:5: r-mutationalpatterns: consider removing this propagated input: r-bsgenome-hsapiens-1000genomes-hs37d5 gnu/packages/bioconductor.scm:7660:5: r-mutationalpatterns: consider removing this propagated input: r-bsgenome-hsapiens-ucsc-hg19 gnu/packages/bioconductor.scm:2347:13: r-affylmgui: updating from version 1.72.0 to version 1.74.0... gnu/packages/bioconductor.scm:9187:13: r-summarizedexperiment: updating from version 1.28.0 to version 1.30.0... gnu/packages/bioconductor.scm:14225:13: r-rbowtie2: updating from version 2.4.2 to version 2.6.0... gnu/packages/bioconductor.scm:14238:5: r-rbowtie2: consider removing this input: zlib gnu/packages/bioconductor.scm:6452:13: r-edaseq: updating from version 2.32.0 to version 2.34.0... gnu/packages/bioconductor.scm:10673:13: r-inspect: updating from version 1.28.0 to version 1.30.0... gnu/packages/bioconductor.scm:20374:13: r-omicade4: updating from version 1.38.0 to version 1.40.0... gnu/packages/bioconductor.scm:6381:13: r-dirichletmultinomial: updating from version 1.40.0 to version 1.42.0... gnu/packages/bioconductor.scm:12933:13: r-a4reporting: updating from version 1.46.0 to version 1.48.0... gnu/packages/bioconductor.scm:3176:13: r-alpsnmr: updating from version 4.0.4 to version 4.2.0... gnu/packages/bioconductor.scm:6343:13: r-diffcyt: updating from version 1.18.0 to version 1.20.0... gnu/packages/bioconductor.scm:11509:13: r-monocle: updating from version 2.26.0 to version 2.28.0... gnu/packages/bioconductor.scm:17607:13: r-pcatools: updating from version 2.10.0 to version 2.12.0... gnu/packages/bioconductor.scm:16691:13: r-rsbml: updating from version 2.56.0 to version 2.58.0... gnu/packages/bioconductor.scm:2379:13: r-affyplm: updating from version 1.74.2 to version 1.76.0... gnu/packages/bioconductor.scm:2388:12: r-affyplm: consider removing this input: zlib gnu/packages/bioconductor.scm:14996:13: r-flowmeans: updating from version 1.58.0 to version 1.60.0... gnu/packages/bioconductor.scm:16281:13: r-htqpcr: updating from version 1.52.0 to version 1.54.0... gnu/packages/bioconductor.scm:5859:13: r-biovizbase: updating from version 1.46.0 to version 1.48.0... gnu/packages/bioconductor.scm:15997:13: r-wavcluster: updating from version 2.32.0 to version 2.34.0... gnu/packages/bioconductor.scm:3523:13: r-aspli: updating from version 2.8.0 to version 2.10.0... gnu/packages/bioconductor.scm:5695:13: r-biomart: updating from version 2.54.1 to version 2.56.0... gnu/packages/bioconductor.scm:13681:13: r-yapsa: updating from version 1.24.0 to version 1.25.0... gnu/packages/bioconductor.scm:11410:13: r-batchelor: updating from version 1.14.1 to version 1.16.0... gnu/packages/bioconductor.scm:3135:13: r-alpine: updating from version 1.24.0 to version 1.25.0... gnu/packages/bioconductor.scm:16761:13: r-biggr: updating from version 1.34.0 to version 1.36.0... gnu/packages/bioconductor.scm:20020:13: r-bionero: updating from version 1.6.1 to version 1.8.0... gnu/packages/bioconductor.scm:2980:13: r-anvil: updating from version 1.10.2 to version 1.12.0... gnu/packages/bioconductor.scm:14964:13: r-flowcore: updating from version 2.10.0 to version 2.12.0... gnu/packages/bioconductor.scm:14449:13: r-rhisat2: updating from version 1.14.0 to version 1.16.0... gnu/packages/bioconductor.scm:17264:13: r-grohmm: updating from version 1.32.0 to version 1.34.0... gnu/packages/bioconductor.scm:11964:13: r-microbiome: updating from version 1.20.0 to version 1.22.0... gnu/packages/bioconductor.scm:13460:13: r-allelicimbalance: updating from version 1.36.0 to version 1.38.0... gnu/packages/bioconductor.scm:12100:13: r-methylumi: updating from version 2.44.0 to version 2.46.0... gnu/packages/bioconductor.scm:15354:13: r-flowsom: updating from version 2.6.0 to version 2.8.0... gnu/packages/bioconductor.scm:15365:5: r-flowsom: consider removing this propagated input: r-cytoml gnu/packages/bioconductor.scm:15365:5: r-flowsom: consider removing this propagated input: r-flowworkspace gnu/packages/bioconductor.scm:15365:5: r-flowsom: consider removing this propagated input: r-ggpointdensity gnu/packages/bioconductor.scm:15365:5: r-flowsom: consider removing this propagated input: r-ggrepel gnu/packages/bioconductor.scm:15365:5: r-flowsom: consider removing this propagated input: r-pheatmap gnu/packages/bioconductor.scm:15365:5: r-flowsom: consider removing this propagated input: r-rcolorbrewer gnu/packages/bioconductor.scm:15365:5: r-flowsom: consider removing this propagated input: r-scattermore gnu/packages/bioconductor.scm:17177:13: r-biocstyle: updating from version 2.26.0 to version 2.28.0... gnu/packages/bioconductor.scm:14704:13: r-biosigner: updating from version 1.26.0 to version 1.28.0... gnu/packages/bioconductor.scm:17201:13: r-biocviews: updating from version 1.66.3 to version 1.68.0... gnu/packages/bioconductor.scm:7976:13: r-organism-dplyr: updating from version 1.26.0 to version 1.28.0... gnu/packages/bioconductor.scm:15825:13: r-watermelon: updating from version 2.4.0 to version 2.6.0... gnu/packages/bioconductor.scm:14307:13: r-biocfilecache: updating from version 2.6.1 to version 2.8.0... gnu/packages/bioconductor.scm:14318:5: r-biocfilecache: consider removing this propagated input: r-rappdirs gnu/packages/bioconductor.scm:20328:13: r-dmrseq: updating from version 1.18.1 to version 1.20.0... gnu/packages/bioconductor.scm:13082:13: r-rgadem: updating from version 2.46.0 to version 2.48.0... gnu/packages/bioconductor.scm:10746:13: r-ruvseq: updating from version 1.32.0 to version 1.34.0... gnu/packages/bioconductor.scm:3600:13: r-asset: updating from version 2.16.0 to version 2.18.0... gnu/packages/bioconductor.scm:10626:13: r-rots: updating from version 1.26.0 to version 1.28.0... gnu/packages/bioconductor.scm:18182:13: r-beachmat: updating from version 2.14.2 to version 2.16.0... gnu/packages/bioconductor.scm:16662:13: r-bifet: updating from version 1.18.0 to version 1.20.0... gnu/packages/bioconductor.scm:11344:13: r-icobra: updating from version 1.26.0 to version 1.28.0... gnu/packages/bioconductor.scm:19953:13: r-mvcclass: updating from version 1.72.0 to version 1.74.0... gnu/packages/bioconductor.scm:5643:13: r-bamsignals: updating from version 1.30.0 to version 1.32.0... gnu/packages/bioconductor.scm:13503:13: r-aucell: updating from version 1.20.2 to version 1.22.0... gnu/packages/bioconductor.scm:17981:13: r-fishpond: updating from version 2.4.1 to version 2.6.0... gnu/packages/bioconductor.scm:17990:12: r-fishpond: consider removing this input: zlib gnu/packages/bioconductor.scm:10799:13: r-scaledmatrix: updating from version 1.6.0 to version 1.7.1... gnu/packages/bioconductor.scm:12656:13: r-enrichplot: updating from version 1.18.4 to version 1.20.0... gnu/packages/bioconductor.scm:14340:13: r-iclusterplus: updating from version 1.34.3 to version 1.36.0... gnu/packages/bioconductor.scm:12343:12: r-tradeseq: updating from version 1.12.0 to version 1.14.0... gnu/packages/bioconductor.scm:4264:13: r-damefinder: updating from version 1.10.1 to version 1.12.0... gnu/packages/bioconductor.scm:15302:13: r-cytoml: updating from version 2.10.0 to version 2.12.0... gnu/packages/bioconductor.scm:15313:5: r-cytoml: consider adding this input: xml2 gnu/packages/bioconductor.scm:15313:5: r-cytoml: consider removing this input: zlib gnu/packages/bioconductor.scm:15315:5: r-cytoml: consider adding this propagated input: r-cpp11 gnu/packages/bioconductor.scm:15315:5: r-cytoml: consider removing this propagated input: r-base64enc gnu/packages/bioconductor.scm:15315:5: r-cytoml: consider removing this propagated input: r-corpcor gnu/packages/bioconductor.scm:15315:5: r-cytoml: consider removing this propagated input: r-lattice gnu/packages/bioconductor.scm:15315:5: r-cytoml: consider removing this propagated input: r-plyr gnu/packages/bioconductor.scm:15315:5: r-cytoml: consider removing this propagated input: r-rcpp gnu/packages/bioconductor.scm:15315:5: r-cytoml: consider removing this propagated input: r-rcpparmadillo gnu/packages/bioconductor.scm:15315:5: r-cytoml: consider removing this propagated input: r-rcppparallel gnu/packages/bioconductor.scm:15315:5: r-cytoml: consider removing this propagated input: r-runit gnu/packages/bioconductor.scm:15315:5: r-cytoml: consider removing this propagated input: r-xml2 gnu/packages/bioconductor.scm:6702:13: r-genomation: updating from version 1.30.0 to version 1.32.0... gnu/packages/bioconductor.scm:12780:13: r-mlinterfaces: updating from version 1.78.0 to version 1.80.0... guix refresh: r-mlinterfaces: consider adding this native input: r-knitr gnu/packages/bioconductor.scm:5578:13: r-annotationhub: updating from version 3.6.0 to version 3.8.0... gnu/packages/bioconductor.scm:17699:13: r-m3c: updating from version 1.20.0 to version 1.22.0... gnu/packages/bioconductor.scm:15152:13: r-rprotobuflib: updating from version 2.10.0 to version 2.12.0... gnu/packages/bioconductor.scm:3331:13: r-annmap: updating from version 1.40.0 to version 1.42.0... gnu/packages/bioconductor.scm:8567:13: r-scannotatr: updating from version 1.4.0 to version 1.6.0... gnu/packages/bioconductor.scm:8197:13: r-protgenerics: updating from version 1.30.0 to version 1.32.0... gnu/packages/bioconductor.scm:8128:13: r-pcamethods: updating from version 1.90.0 to version 1.92.0... guix refresh: r-pcamethods: consider adding this input: rcpp gnu/packages/bioconductor.scm:6887:13: r-genomicranges: updating from version 1.50.2 to version 1.52.0... gnu/packages/bioconductor.scm:10532:13: r-goseq: updating from version 1.50.0 to version 1.52.0... gnu/packages/bioconductor.scm:11276:13: r-lpsymphony: updating from version 1.26.3 to version 1.28.0... gnu/packages/bioconductor.scm:5932:13: r-category: updating from version 2.64.0 to version 2.66.0... gnu/packages/bioconductor.scm:3230:13: r-altcdfenvs: updating from version 2.60.0 to version 2.62.0... gnu/packages/bioconductor.scm:16717:13: r-hypergraph: updating from version 1.70.0 to version 1.72.0... gnu/packages/bioconductor.scm:5619:13: r-aroma-light: updating from version 3.28.0 to version 3.30.0... gnu/packages/bioconductor.scm:12855:13: r-a4core: updating from version 1.46.0 to version 1.48.0... gnu/packages/bioconductor.scm:16044:13: r-tilingarray: updating from version 1.76.0 to version 1.78.0... gnu/packages/bioconductor.scm:10221:13: r-marray: updating from version 1.76.0 to version 1.78.0... gnu/packages/bioconductor.scm:20393:13: r-omnipathr: updating from version 3.5.25 to version 3.8.0... gnu/packages/bioconductor.scm:3965:13: r-bandits: updating from version 1.14.2 to version 1.16.0... gnu/packages/bioconductor.scm:9951:13: r-mbkmeans: updating from version 1.14.0 to version 1.16.0... gnu/packages/bioconductor.scm:16436:13: r-acme: updating from version 2.54.0 to version 2.56.0... gnu/packages/bioconductor.scm:19765:13: r-basilisk-utils: updating from version 1.10.0 to version 1.12.0... gnu/packages/bioconductor.scm:15531:13: r-chicago: updating from version 1.26.0 to version 1.28.0... gnu/packages/bioconductor.scm:11758:13: r-scone: updating from version 1.22.0 to version 1.24.0... gnu/packages/bioconductor.scm:4093:13: r-biocgenerics: updating from version 0.44.0 to version 0.46.0... gnu/packages/bioconductor.scm:18322:13: r-maftools: updating from version 2.14.0 to version 2.16.0... gnu/packages/bioconductor.scm:4795:13: r-drimseq: updating from version 1.26.0 to version 1.28.0... gnu/packages/bioconductor.scm:10957:13: r-biocsingular: updating from version 1.14.0 to version 1.16.0... gnu/packages/bioconductor.scm:9737:13: r-quantsmooth: updating from version 1.64.0 to version 1.66.0... gnu/packages/bioconductor.scm:11238:13: r-karyoploter: updating from version 1.24.0 to version 1.26.0... gnu/packages/bioconductor.scm:12556:13: r-fcscan: updating from version 1.12.0 to version 1.14.0... gnu/packages/bioconductor.scm:9022:12: r-slingshot: updating from version 2.6.0 to version 2.8.0... gnu/packages/bioconductor.scm:16232:13: r-variancepartition: updating from version 1.28.9 to version 1.30.0... gnu/packages/bioconductor.scm:13642:13: r-somaticsignatures: updating from version 2.34.0 to version 2.36.0... gnu/packages/bioconductor.scm:20105:13: r-bionetstat: updating from version 1.18.0 to version 1.20.0... gnu/packages/bioconductor.scm:20135:5: r-bionetstat: consider adding this native input: esbuild gnu/packages/bioconductor.scm:20135:5: r-bionetstat: consider adding this native input: r-rmarkdown gnu/packages/bioconductor.scm:2264:13: r-adsplit: updating from version 1.68.0 to version 1.70.0... gnu/packages/bioconductor.scm:10857:13: r-treesummarizedexperiment: updating from version 2.6.0 to version 2.8.0... gnu/packages/bioconductor.scm:9590:13: r-zlibbioc: updating from version 1.44.0 to version 1.46.0... gnu/packages/bioconductor.scm:17514:13: r-biocset: updating from version 1.12.1 to version 1.14.0... gnu/packages/bioconductor.scm:10890:13: r-ggtree: updating from version 3.6.2 to version 3.8.0... gnu/packages/bioconductor.scm:3062:13: r-alevinqc: updating from version 1.14.0 to version 1.16.0... gnu/packages/bioconductor.scm:6993:13: r-gseabase: updating from version 1.60.0 to version 1.62.0... gnu/packages/bioconductor.scm:3439:13: r-aseb: updating from version 1.42.0 to version 1.44.0... gnu/packages/bioconductor.scm:12186:13: r-linnorm: updating from version 2.22.2 to version 2.24.0... gnu/packages/bioconductor.scm:4525:13: r-deconrnaseq: updating from version 1.40.0 to version 1.42.0... gnu/packages/bioconductor.scm:18527:13: r-scater: updating from version 1.26.1 to version 1.28.0... gnu/packages/bioconductor.scm:18536:5: r-scater: consider adding this propagated input: r-densvis gnu/packages/bioconductor.scm:18536:5: r-scater: consider removing this propagated input: r-gridextra gnu/packages/bioconductor.scm:4623:13: r-decoupler: updating from version 2.4.0 to version 2.6.0... gnu/packages/bioconductor.scm:12734:13: r-clusterexperiment: updating from version 2.18.2 to version 2.20.0... gnu/packages/bioconductor.scm:18385:13: r-chromvar: updating from version 1.20.2 to version 1.22.0... gnu/packages/bioconductor.scm:14572:13: r-birewire: updating from version 3.30.0 to version 3.32.0... gnu/packages/bioconductor.scm:8783:13: r-seqpattern: updating from version 1.30.0 to version 1.32.0... gnu/packages/bioconductor.scm:3466:13: r-asgsca: updating from version 1.32.0 to version 1.34.0... gnu/packages/bioconductor.scm:20147:13: r-bioqc: updating from version 1.26.0 to version 1.28.0... gnu/packages/bioconductor.scm:10259:12: r-cghcall: updating from version 2.60.0 to version 2.62.0... gnu/packages/bioconductor.scm:9295:13: r-topgo: updating from version 2.50.0 to version 2.52.0... gnu/packages/bioconductor.scm:5436:13: r-affxparser: updating from version 1.70.0 to version 1.72.0... gnu/packages/bioconductor.scm:10471:13: r-genomicinteractions: updating from version 1.32.0 to version 1.34.0... gnu/packages/bioconductor.scm:10140:13: r-chippeakanno: updating from version 3.32.0 to version 3.34.0... gnu/packages/bioconductor.scm:9846:12: r-greylistchip: updating from version 1.30.0 to version 1.32.0... gnu/packages/bioconductor.scm:10084:13: r-pepsnmr: updating from version 1.16.0 to version 1.18.0... gnu/packages/bioconductor.scm:8397:13: r-rhdf5filters: updating from version 1.10.1 to version 1.12.0... gnu/packages/bioconductor.scm:8410:5: r-rhdf5filters: consider removing this input: zlib gnu/packages/bioconductor.scm:14167:13: r-zinbwave: updating from version 1.20.0 to version 1.22.0... gnu/packages/bioconductor.scm:8488:13: r-rtracklayer: updating from version 1.58.0 to version 1.60.0... gnu/packages/bioconductor.scm:15577:13: r-cicero: updating from version 1.16.2 to version 1.18.0... gnu/packages/bioconductor.scm:4383:13: r-decipher: updating from version 2.26.0 to version 2.28.0... gnu/packages/bioconductor.scm:11036:13: r-savr: updating from version 1.36.0 to version 1.37.0... gnu/packages/bioconductor.scm:10240:12: r-cghbase: updating from version 1.58.0 to version 1.60.0... gnu/packages/bioconductor.scm:6749:13: r-genomeinfodb: updating from version 1.34.9 to version 1.36.0... gnu/packages/bioconductor.scm:3733:13: r-awfisher: updating from version 1.12.0 to version 1.14.0... gnu/packages/bioconductor.scm:18676:13: r-mscoreutils: updating from version 1.10.0 to version 1.12.0... gnu/packages/bioconductor.scm:3871:13: r-bader: updating from version 1.36.0 to version 1.38.0... gnu/packages/bioconductor.scm:14056:13: r-wrench: updating from version 1.16.0 to version 1.18.0... gnu/packages/bioconductor.scm:18042:13: r-hitc: updating from version 1.42.0 to version 1.44.0... gnu/packages/bioconductor.scm:12988:13: r-a4: updating from version 1.46.0 to version 1.48.0... gnu/packages/bioconductor.scm:2292:13: r-affixcan: updating from version 1.16.0 to version 1.18.0... gnu/packages/bioconductor.scm:15228:13: r-flowstats: updating from version 4.10.0 to version 4.12.0... gnu/packages/bioconductor.scm:4147:13: r-cardelino: updating from version 1.0.0 to version 1.2.0... gnu/packages/bioconductor.scm:16126:13: r-variantfiltering: updating from version 1.34.0 to version 1.36.0... gnu/packages/bioconductor.scm:9150:13: r-structuralvariantannotation: updating from version 1.14.1 to version 1.16.0... gnu/packages/bioconductor.scm:7188:13: r-limma: updating from version 3.54.2 to version 3.56.0... gnu/packages/bioconductor.scm:4185:13: r-coverageview: updating from version 1.36.0 to version 1.38.0... gnu/packages/bioconductor.scm:14406:13: r-sgseq: updating from version 1.32.0 to version 1.34.0... gnu/packages/bioconductor.scm:12504:13: r-anota: updating from version 1.46.0 to version 1.48.0... gnu/packages/bioconductor.scm:15950:13: r-seqbias: updating from version 1.46.0 to version 1.48.0... gnu/packages/bioconductor.scm:15961:5: r-seqbias: consider adding this propagated input: r-zlibbioc gnu/packages/bioconductor.scm:6683:13: r-geneoverlap: updating from version 1.34.0 to version 1.36.0... gnu/packages/bioconductor.scm:19636:13: r-bgeedb: updating from version 2.24.0 to version 2.26.0... gnu/packages/bioconductor.scm:17585:13: r-biodist: updating from version 1.70.0 to version 1.72.0... gnu/packages/bioconductor.scm:12001:13: r-milor: updating from version 1.6.0 to version 1.8.1... gnu/packages/bioconductor.scm:13435:13: r-annotationtools: updating from version 1.72.0 to version 1.74.0... gnu/packages/bioconductor.scm:19446:13: r-guitar: updating from version 2.14.0 to version 2.16.0... gnu/packages/bioconductor.scm:15118:13: r-flowclust: updating from version 3.36.1 to version 3.38.0... gnu/packages/bioconductor.scm:11882:13: r-bumphunter: updating from version 1.40.0 to version 1.42.0... gnu/packages/bioconductor.scm:5521:13: r-annotationfilter: updating from version 1.22.0 to version 1.24.0... gnu/packages/bioconductor.scm:17876:13: r-s4vectors: updating from version 0.36.2 to version 0.38.0... guix refresh: r-s4vectors: consider adding this native input: r-knitr gnu/packages/bioconductor.scm:10334:13: r-chipcomp: updating from version 1.28.0 to version 1.30.0... gnu/packages/bioconductor.scm:10771:13: r-biocneighbors: updating from version 1.16.0 to version 1.18.0... gnu/packages/bioconductor.scm:18735:13: r-biocio: updating from version 1.8.0 to version 1.10.0... gnu/packages/bioconductor.scm:3895:13: r-badregionfinder: updating from version 1.26.0 to version 1.28.0... gnu/packages/bioconductor.scm:6938:13: r-globaltest: updating from version 5.52.1 to version 5.54.0... gnu/packages/bioconductor.scm:3627:13: r-atena: updating from version 1.4.1 to version 1.6.0... gnu/packages/bioconductor.scm:3637:5: r-atena: consider removing this propagated input: r-scales gnu/packages/bioconductor.scm:2870:13: r-animalcules: updating from version 1.14.0 to version 1.16.0... gnu/packages/bioconductor.scm:4113:13: r-breakpointr: updating from version 1.16.0 to version 1.18.0... gnu/packages/bioconductor.scm:7858:13: r-mzr: updating from version 2.32.0 to version 2.34.0... gnu/packages/bioconductor.scm:7884:5: r-mzr: consider removing this input: boost gnu/packages/bioconductor.scm:7884:5: r-mzr: consider removing this input: zlib gnu/packages/bioconductor.scm:4578:13: r-deconvr: updating from version 1.4.3 to version 1.6.0... gnu/packages/bioconductor.scm:14200:13: r-zfpkm: updating from version 1.20.0 to version 1.22.0... gnu/packages/bioconductor.scm:4212:12: r-cummerbund: updating from version 2.40.0 to version 2.42.0... gnu/packages/bioconductor.scm:7419:13: r-metaneighbor: updating from version 1.18.0 to version 1.20.0... gnu/packages/bioconductor.scm:5253:13: r-affy: updating from version 1.76.0 to version 1.78.0... gnu/packages/bioconductor.scm:8423:13: r-rsamtools: updating from version 2.14.0 to version 2.16.0... guix refresh: r-rsamtools: consider adding this native input: r-knitr gnu/packages/bioconductor.scm:8443:5: r-rsamtools: consider adding this propagated input: r-zlibbioc gnu/packages/bioconductor.scm:17004:13: r-graphite: updating from version 1.44.0 to version 1.46.0... guix refresh: r-graphite: consider adding this native input: r-r-rsp gnu/packages/bioconductor.scm:15644:13: r-circrnaprofiler: updating from version 1.12.2 to version 1.14.0... gnu/packages/bioconductor.scm:13009:13: r-abseqr: updating from version 1.16.0 to version 1.18.0... gnu/packages/bioconductor.scm:5491:13: r-annotationdbi: updating from version 1.60.2 to version 1.62.0... gnu/packages/bioconductor.scm:8917:13: r-transcriptr: updating from version 1.26.0 to version 1.28.0... gnu/packages/bioconductor.scm:13057:13: r-bacon: updating from version 1.26.0 to version 1.28.0... gnu/packages/bioconductor.scm:16383:13: r-ace: updating from version 1.16.0 to version 1.18.0... gnu/packages/bioconductor.scm:18820:13: r-catalyst: updating from version 1.22.0 to version 1.24.0... gnu/packages/bioconductor.scm:3365:13: r-antiprofiles: updating from version 1.38.0 to version 1.40.0... gnu/packages/bioconductor.scm:15779:13: r-genie3: updating from version 1.20.0 to version 1.22.0... gnu/packages/bioconductor.scm:19716:13: r-genetclassifier: updating from version 1.38.0 to version 1.40.0... gnu/packages/bioconductor.scm:19091:13: r-gviz: updating from version 1.42.1 to version 1.44.0... gnu/packages/bioconductor.scm:9983:13: r-multtest: updating from version 2.54.0 to version 2.56.0... gnu/packages/bioconductor.scm:16739:13: r-hyperdraw: updating from version 1.50.0 to version 1.52.0... gnu/packages/bioconductor.scm:11216:13: r-ebseq: updating from version 1.38.0 to version 1.40.0... gnu/packages/bioconductor.scm:14806:13: r-flowai: updating from version 1.28.0 to version 1.30.0... gnu/packages/bioconductor.scm:3824:13: r-basespacer: updating from version 1.42.0 to version 1.44.0... gnu/packages/bioconductor.scm:4830:13: r-dss: updating from version 2.46.0 to version 2.48.0... gnu/packages/bioconductor.scm:17552:13: r-biocworkflowtools: updating from version 1.24.0 to version 1.26.0... gnu/packages/bioconductor.scm:11837:13: r-illuminaio: updating from version 0.40.0 to version 0.42.0... gnu/packages/bioconductor.scm:19408:13: r-chromstar: updating from version 1.24.0 to version 1.26.0... gnu/packages/bioconductor.scm:4242:13: r-dama: updating from version 1.70.0 to version 1.72.0... gnu/packages/bioconductor.scm:12589:13: r-fgsea: updating from version 1.24.0 to version 1.26.0... gnu/packages/bioconductor.scm:12599:5: r-fgsea: consider adding this propagated input: r-scales gnu/packages/bioconductor.scm:16463:13: r-acde: updating from version 1.28.0 to version 1.30.0... gnu/packages/bioconductor.scm:16335:13: r-universalmotif: updating from version 1.16.0 to version 1.18.0... gnu/packages/bioconductor.scm:16354:5: r-universalmotif: consider adding this propagated input: r-matrixgenerics gnu/packages/bioconductor.scm:14780:13: r-rsubread: updating from version 2.12.3 to version 2.14.0... gnu/packages/bioconductor.scm:14790:12: r-rsubread: consider removing this input: zlib gnu/packages/bioconductor.scm:1737:13: r-missmethyl: updating from version 1.32.1 to version 1.34.0... gnu/packages/bioconductor.scm:8073:13: r-pcaexplorer: updating from version 2.24.0 to version 2.26.0... gnu/packages/bioconductor.scm:6298:13: r-dexseq: updating from version 1.44.0 to version 1.46.0... gnu/packages/bioconductor.scm:18883:13: r-erma: updating from version 1.14.0 to version 1.16.0... gnu/packages/bioconductor.scm:9117:13: r-stringdb: updating from version 2.10.1 to version 2.12.0... gnu/packages/bioconductor.scm:10512:13: r-ctc: updating from version 1.72.0 to version 1.74.0... gnu/packages/bioconductor.scm:13136:12: r-motifdb: updating from version 1.40.0 to version 1.42.0... gnu/packages/bioconductor.scm:13153:5: r-motifdb: consider adding this native input: r-formatr gnu/packages/bioconductor.scm:13153:5: r-motifdb: consider adding this native input: r-markdown gnu/packages/bioconductor.scm:13153:5: r-motifdb: consider adding this native input: r-rmarkdown gnu/packages/bioconductor.scm:7725:13: r-msnbase: updating from version 2.24.2 to version 2.26.0... gnu/packages/bioconductor.scm:3922:13: r-bambu: updating from version 3.0.8 to version 3.2.0... gnu/packages/bioconductor.scm:18351:13: r-motifmatchr: updating from version 1.20.0 to version 1.22.0...