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"/gnu/store/8fb0nkg1y32797rxybr1l944vny85fcf-profile" "/gnu/store/0m0vd873jp61lcm4xa3ljdgx381qa782-guile-3.0.2" "sample_data/sample.gtf" "./output/mapped_reads/HBR_Rep1_Aligned.sortedByCoord.out.bam" "./output/mapped_reads/HBR_Rep2_Aligned.sortedByCoord.out.bam" "./output/mapped_reads/HBR_Rep3_Aligned.sortedByCoord.out.bam" "./output/mapped_reads/UHR_Rep1_Aligned.sortedByCoord.out.bam" "./output/mapped_reads/UHR_Rep2_Aligned.sortedByCoord.out.bam" "./output/mapped_reads/UHR_Rep3_Aligned.sortedByCoord.out.bam")))) (lambda () (unless (file-exists? "/bin/sh") (unless (file-exists? "/bin") (mkdir "/bin")) (symlink "/gnu/store/fvhj74pghapbjvsvj27skvkra1by1965-bash-minimal-5.0.16/bin/sh" "/bin/sh")) (unless (file-exists? "/etc") (mkdir "/etc")) (write-passwd (list passwd)) (write-group groups) (system* "/gnu/store/mac98crbs30mahn979sn0k111iraqr00-gwl-htseq_count.scm") (for-each (lambda (output) (let ((target (string-append "/gwl/" output))) (mkdir-p (dirname target)) (copy-file output target))) (filter file-exists? (quote ("./output/feature_counts/raw_counts/htseq_stats.txt" "./output/feature_counts/raw_counts/counts_from_star_htseq-count.txt" "./output/logs/htseq-count.log"))))) #:guest-uid uid #:guest-gid gid)))